Aakrosh Ratan headshot
AR

Aakrosh Ratan

Associate Professor
Unit: School of Medicine
Department: PBHS Public Health Sciences Admin
Office location and address
1335 Lee St
Charlottesville, Virginia 22903
Education
PhD, Pennsylvania State University, University Park, PA
SM, National University of Singapore
BTech, Indian Institute of Technology
LGL Leukemia as a Model of Cellular Immunotherapy
Source: AstraZeneca
April 07, 2021 – April 06, 2024
Molecular dissection of a microRNA cluster network of aggressiveness
Source: Eastern Virginia Medical School
November 01, 2020 – October 31, 2022
MD-CPHG-MD-CPHG Methods to Stu
Source: Nanyang Technological University
October 15, 2018 – August 14, 2022
American Cancer Society- Institutional Research Grant
Source: American Cancer Society
January 01, 2017 – June 19, 2021
Ratan Research Collaboration Agreement with Genentech
Source: Genentech, Inc
November 29, 2018 – November 28, 2020
Searching for Driving Mutations in Mycosis Fungoides with Single-Cell Sequencing Approach
Source: University Of Pittsburgh
January 01, 2018 – December 31, 2019
MD-CPHG Methods to Study Variation Landscapes in Genomes and Biomes
Source: Nanyang Technological University
October 15, 2015 – October 14, 2018
MD-CPHG New Algorithms and tools for large-scale genomic analysis
Source: University of Utah
April 01, 2015 – March 31, 2016
Cancer Center Support Grant - Year 21
Source: U.S. NIH Cancer Institute
June 05, 2012 – January 31, 2016
CS 6501: Special Topics in Computer Science
Credits: 3
Course content varies by section and is selected to fill timely and special interests and needs of students. See CS 7501 for example topics. May be repeated for credit when topic varies. Prerequisite: Instructor permission.
BIOC 8145: Bioinformatics and Functional Analysis of Genomes
Credits: 2
The class covers statistical and programming background as well as introduction to software tools for analysis of functional genomics data sets and will focus on analysis of high throughput sequence data including RNA-Seq and ChIP-Seq. Students will also learn how to further summarize their data from a regulatory network perspective by performing TF-DNA motif, metabolic/signaling pathway and gene ontology (GO) analysis. Prerequisite: Bioinformatics and Protein Structure or permission of instructor
BIMS 8601: Computational Genomics
Credits: 3
Students will learn foundational computational methods for analysis of data from genome, epigenome, and transcriptome sequencing experiments. The course will cover various biological data types, algorithms, statistical and computational methods, and application areas in genomics and systems biology. Prior coursework/experience in linear algebra, UNIX, and R and Python programming required.
BIMS 8993: Non-topical Research: Visiting Research Graduate Traineeship Program
Credits: 1–12
This course is for visiting research students participating in the BIMS Visiting Research Graduate Trianeeship Program (VRGTP). Students in this course are dual enrolled in their home institution and will participate in research for a minimum of 4 semesters. The research will assist them in completing their degree at their home institution. Non-degree students.
BIMS 9999: Non-Topical Research
Credits: 1–12
For doctoral dissertation following advancement to PhD candidacy.